Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEKTLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYRSKHS
4A0Z Chain:B ((52-188))----------------------------------------------IPELRKRIKLVAEKNY-DQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARV--VNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDK--


General information:
TITO was launched using:
RESULT:

Template: 4A0Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 673 -76030 -112.97 -554.96
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -112.97
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_4A0Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A0Z-query.scw
PDB file : Tito_Scwrl_4A0Z.pdb: