Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLSVFDLEED-PLDQAIADAET------FPFMGERRLVIVKNPYFLTGEKKKEKIEHNVSALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDREEITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFY-DLLKQNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY
1SXJ Chain:B ((32-320))---RLQQIAKDG-NMPHMIISGMPGIGKTTSVHCLAHELLGR-SYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTA--------GAQQALRRTMELYSNSTRFAFACN--QS---NKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHG---LVNADNVFKIVDSP---HPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKES----------------------------------VRLEMIKEIGLTHMRILEGVG-TYLQLASMLAKIHKLN-------


General information:
TITO was launched using:
RESULT:

Template: 1SXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1215 12397 10.20 44.12
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : 10.20
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_1SXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SXJ-query.scw
PDB file : Tito_Scwrl_1SXJ.pdb: