Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQRQIAAEKKLEKEREA---------KRKKQQEEKAER------QRLAEQQAAER-QRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTEAPSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
1F5N Chain:A ((484-582))-----------------------------------------------------------------------------EKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1F5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 5 601 120.20 7.24
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 120.20
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.793

(partial model without unconserved sides chains):
PDB file : Tito_1F5N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F5N-query.scw
PDB file : Tito_Scwrl_1F5N.pdb: