Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTHLQAKATLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEA-GISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWP-------------VEGK-------YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQ----------LLDHPVLADIAQTYNKSVAQIILRWDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVGPDPDNFDF
3FX4 Chain:A ((8-297))----------LHTGQKMPLIGLGTWKSEPG-QVKAAIKYALTVGYRHIDCAAIYGNELEIGEALQETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRILQNIQVFDFTFSPEEMKQLDALNKNLR----------


General information:
TITO was launched using:
RESULT:

Template: 3FX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1319 -21676 -16.43 -83.69
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -16.43
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_3FX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FX4-query.scw
PDB file : Tito_Scwrl_3FX4.pdb: