Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSKLLRGTFVLTLGTYISRILGMVYLIPFSIMVGATGGALFQYGYNQYTLFLNIATMGFPAAVSKFVSKYNSKGDYETSRKMLKAGMSVMLVTGMIAFFILYLSAPMFAEISLGGKDNNGLTIDHVVYV-IRMVSLALLVVPIMSLVRGFFQGHQMMGPTAVSQVVEQIVRIIFLLSATFLILKVFNGGLVIAVGYATFAALIGAFGGLVVLYIYWNKRKGSLLAMMPNTGPTANLSYKKMFFELFSYAAPYVFVGLAIPLYNYIDTNTFNKAMIEAGHQAISQDMLAILTLYVQKLVMIPVSLATAFGLTLIPTITESFTSGNYKLLNQQINQTMQTILFLIIPAVVGISLLSGPTYTFFYGSESLHPELGANILLWYSPVAILFSLFTVNAAILQGINKQKFAVVSLVIGVVIKLVLNVPLIKLMQADGAILATALGYIASLLYGFIMIKRHAGYSYKILVKRTVLMLVLSAIMGIAVKIVQWVLGFFISYQDGQMQAAIVVVIAAAVGGAVYLYCGYRLGFLQKILGRRLPGFFRKGRHAG
4XI6 Chain:A ((1-378))------SRVMVEGVGARVVR------------------GPDWKWGKQD-------GGEGHVGTVRSFESP-------EEVVVVWDNGTAANYRCSGAYDLRILDSAPT-------GIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDK-------HHLRHRFYRITTPGSERVLLESRRKSKKITARGIFA--------GARVVRGVDWQ---------WEDQDGGNGRRGKVTEIQDWSASSPH---SAAYVLWDNGAKNLYRV-----GFEGMS-DLKCVQDAKGGSFYRDHCPVLGLVNIDLDLEIVQSLQHGHGGW-TDGMFETLTTT-----GTVCGID--EDHDIVVQYPSGN---------------------RWTFNPAVLTKASQFQ-------VGDLVQVCYDLERIKLLQRG-----------------------HGEWAEAMLPT-----------LGKVGRVQQI-------YSDSDLKVEV---------------CGTSWTYNPAAVSKV------------


General information:
TITO was launched using:
RESULT:

Template: 4XI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2072 -105511 -50.92 -291.47
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -50.92
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_4XI6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XI6-query.scw
PDB file : Tito_Scwrl_4XI6.pdb: