Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHIYKKLGAAFFALLLIAALAACGNNSESKGSASDSKGAETFTYKAENGNVKIPKHPKRVVVMADGYYGYFKTLGIN--VVGAPENVFKN-PYYKGKTNGVENIGDGTSV--EKVIDLNPDLIIVWTTQGADIKKLEKIAPTVAVKYDKLDNIEQLKEF-------AKMTGTEDKAEKWLAKWDKKVAAAKTKIKKAVGDKTISIMQTNGKDIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDFAGDYIFAGPWQ----SGGDDGGVFESSIWKNLNAVKNGHVYKMDPIGFYFTDPISLEGQLEFITESLTK
3ZKW Chain:A ((27-304))----------------------------------SMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKVVGVPA---KNLPKYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFV---GLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDE---DKKALIILTNSNKISAFGPQSRFG--IIHDVLGINAV----DENIKVGTHGKSINSEFILEKNPDYIFVVDRNVILGNKERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILE----


General information:
TITO was launched using:
RESULT:

Template: 3ZKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1283 66199 51.60 252.67
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 51.60
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_3ZKW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZKW-query.scw
PDB file : Tito_Scwrl_3ZKW.pdb: