Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIGSVTTAGWLMFAGIVLFSGSLYILSVTQISILGAITPLGGVAFIISWIMIVVAAVKYL
2YND Chain:A ((96-122))---------------------------------YLKTWHIGVKYDASNKLIGFISAIPTD---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 42 -10450 -248.80 -387.02
target 2D structure prediction score : 0.00
Monomeric hydrophicity matching model chain A : 0.42

3D Compatibility (PKB) : -248.80
2D Compatibility (Sec. Struct. Predict.) : 0.00
1D Compatibility (Hydrophobicity) : 0.42
QMean score : -0.101

(partial model without unconserved sides chains):
PDB file : Tito_2YND.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YND-query.scw
PDB file : Tito_Scwrl_2YND.pdb: