Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVG-AEIVSPGSVLVSGRLLSDITRALPN-KPVDVHVEGNRVALTCGNARFSLPTMPVEDYPTLPTLPEETGL-LPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSD-VRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADRGAQ-VRMEFADGSVRLSAGADDVGRAEEDLVVDYAGEPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG |
| 1UNN Chain:A ((1-366)) | ------------MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPS--HSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIF-------TSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDS-----VSSVQIED-------------AASQSAAYVVMPMRL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247392 for 2971 contacts (-83.3/contact) +
2D Compatibility (PS) -38924 + (NN) -16041 + (LL) 196
1D Compatibility (HY) -24800 + (ID) 5500
Total energy: -332461.0 ( -111.90 by residue)
QMean score : 0.556
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