Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGP------GLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDY |
1KOK Chain:A ((110-194)) | ---------------------------------------------------------------------------------------------------------LGGVTAVQEMQGPKIPWRCGRVDTPEDTTPD-NGRLP-DADKDADYVR-------------TFFQRLNMNDREVVALMGAHALGKTHLKNS-GYEGPWGAA-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8823 for 346 contacts (-25.5/contact) +
2D Compatibility (PS) -8584 + (NN) -3489 + (LL) 14096
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -11500.0 ( -33.24 by residue)
QMean score : -0.074
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