Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITAGGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLR-YSSTALERAEDPILNG--------SDRRLFGRRLADFFTGRDPR-GGNVDTTINPRIQQAGWDAMQQGCY--GPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQLTAAPTIPLPGSTAQLENYGGAPCG-DEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAESTVGPIPD-----SAALGMTSIGQKDVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQKGA-----IPGVQIASKTGTAEH---GTDP-RHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP |
| 5DF8 Chain:A ((136-536)) | -------------------------------------------------------------------------FRRFYPAGEVVAHAVGFTDVDDRGREGIELAFDEWLAGVPGKRQVLKDRR--GRVIKDVQVTKNAKPGKTLALSIDLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTYNPN--------------NRRNLQPAA-MRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDV----YPG-TLQIGRYTIRDVSRNSRQLDLTGILIKSSNVGISKIAFDIGAESIYSVMQQVGLG---QDTGLGFPGERVGNLPNHRKWPKAETATLAYGY-GLSVTAIQLAHAYAALANDGKSVPLSMTRVDRVPDGVQV-----------ISPEVASTVQGML---QQVVEAQGGVFRAQVPGYHAAGKSGTARKVSVGTKGYRENAYRSLFAGFAPATDPRIAMVVVIDE-PSKAGYFGGLVSAPVFSKVMAGALR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150581 for 3229 contacts (-46.6/contact) +
2D Compatibility (PS) -40318 + (NN) -23844 + (LL) 7884
1D Compatibility (HY) -22800 + (ID) 5550
Total energy: -235209.0 ( -72.84 by residue)
QMean score : 0.462
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