Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELADRVNLAITALRDEVEAENRARYGGRLQ
3GL5 Chain:A ((124-177))
---------------------------------------------YRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLADPAAYA-----DEVRADER--------
General information:
TITO was launched using:
RESULT:
Template:
3GL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1482 for 246 contacts (-6.0/contact) +
2D Compatibility (PS) -5492 + (NN) -1010 + (LL) 4208
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -7176.0 ( -29.17 by residue)
QMean score : 0.080
(partial model without unconserved sides chains):
PDB file :
Tito_3GL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GL5-query.scw
PDB file :
Tito_Scwrl_3GL5.pdb
: