Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MITRY------------KPESGFVARSGGPDRKRPHDWIVWHFTHADNLPGIITAGRLLADSA--VTPTTEVAYNPVKELRRHKVVAPDSRYPASMAS------------DHVPFYIAARSPMLYVVCKGHSGYSGGAGPLVHLGVALGDIIDADLTWCASDGNAAASYTKFSRQVDTLGTFVDFDLLCQ-----RQWHNTDDDPNRQSRRAAEILVYG------------HVPFELVSYVCCYNTETMTRVRTLLDP----VGGVRKYVIKPGMYY------- |
| 4P5W Chain:A ((31-394)) | TKRADPAELRTIFLKYASIEKNGEFFMSPNDFVTRYLNIFSQPNPKTVELLSGVVDQTK--DGLISFQEFVAFESVLCAPDALFMVAFQLFDKAGKGEVTFEDVKQVFGQTTIHQHIPFNWDSEFVQLHFGKERKRHLTYAEFTQFLLEIQLEHAKQAFVQRDNARTGRVTAIDFRDIMVTIRPHVLTPFVEECLVAAAGGTTSHQVS-FSYFNGFNSLLNNMELIRKIYSTLAGTRKDVEVTKEEFVLAAQKFGQVTPMEVDILFQLADLYEPRGRMTLADIERIAPPNPDHVGGYKLAVATFAGIENKFGLYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54427 for 1573 contacts (-34.6/contact) +
2D Compatibility (PS) -23062 + (NN) -2512 + (LL) -260
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: -85011.0 ( -54.04 by residue)
QMean score : 0.102
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