Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAARNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPV----LTLYGIPHRDCGSYASGG---FATG--TDYRGWIDAVASGLGSSP---ATIIVEPDALA-MADCLSPDQ----RQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWL--------SAEAMAARLNDVGVGRA-RGFSLNVSNF----------YTTD----EEIGYGEAISGLTNG----SHYVIDTSRNGAGPAPDAPL-NWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGT-----------CG-----RGEPQAGRFVSQYAIDLAHNAGQ |
| 1OC5 Chain:A ((46-361)) | ---------------------------------------------------------------------------------------------------------------------------VPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDL-PHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNGTSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNAN- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -69572 for 1952 contacts (-35.6/contact) +
2D Compatibility (PS) -27581 + (NN) -16021 + (LL) 8988
1D Compatibility (HY) -17200 + (ID) 4550
Total energy: -125936.0 ( -64.52 by residue)
QMean score : 0.420
|
|
|