Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPTDRRVRADAARNRARVLEVAYQTFAADGL-SVPVDEIARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLKSKHPGDALFAFLRSMVLQWGATDRGLVEA----LAGVGIEISSAAPEAEADFLDLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQSYNAELAAKVTDVALDGLRANRK
1VI0 Chain:A ((12-151))
-----------------QIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEKMGQFIERMEEDIKEKATAKEKLALVISKHFSLLAGDHNLAIVTQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDV-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1VI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70887 for 895 contacts (-79.2/contact) +
2D Compatibility (PS) -15159 + (NN) -10568 + (LL) 4604
1D Compatibility (HY) -11600 + (ID) 1650
Total energy: -105260.0 ( -117.61 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_1VI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VI0-query.scw
PDB file :
Tito_Scwrl_1VI0.pdb
: