Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGLLLAAILAPLAASIASLITGWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLATAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITAFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFS-VLIRLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAAAGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAAGAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVGLP |
4HE8 Chain:N ((51-425)) | -----------------------------------------------------------GPYAVDGVSQVFTLLALLG----ALWTVGLVRS----------GRFEFYLLVLYAALGMHLLASTRHLLLMLVALEALSLPLYALATWRR-GQGLEAALKYFLLGALAAAFFLYGAALFYGATGS--------LVLGAPGE------GPLYALALGLLLVGLGFKAALAPFHFWTPDVYQGSPTPVVLFMATS-VKAAAFAALLRVAAP----------PEALALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYMALALYTGNA---QALGFYLLTYVLATGLAFAVLSQIS--PDRVPLEALRGLYRKDPLLGLAFLVAMLSLLGLPPLAGFWGKYLAFAEAARAGAWGVLVLALVTSAVSAYYYLGLGLAVFARPEETPFR--PGPPWARAAVVAAGVLLLALGLLPGLVLPALAA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -455192 for 3531 contacts (-128.9/contact) +
2D Compatibility (PS) -39783 + (NN) -25961 + (LL) 8500
1D Compatibility (HY) -23200 + (ID) 5050
Total energy: -540686.0 ( -153.13 by residue)
QMean score : 0.338
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