Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLP-YRITSRVTALKP-NELVEWSH---PL---GHRWRWEFESLSP---TLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
3W9R Chain:A ((32-183)) | -----------------------------------------------------------------------RENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPF--VSRCTVIG-DPEIGSLREVNVKS-GLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQGNT--KDET-----CYFVEALIRCNLKSLADVSERLA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31455 for 1022 contacts (-30.8/contact) +
2D Compatibility (PS) -15396 + (NN) -4177 + (LL) 4384
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -50194.0 ( -49.11 by residue)
QMean score : 0.435
|
|
|