Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSARCQITGRTVGFGKAVSH-------------SHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVIDRDGHRGRRRAARAGSAPAHFARQAGSSLRTAAIL
2ZJR Chain:U ((8-79))
-------TGKKNLVVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIRE--NGQVKTVWLSANALRTLSKGPYKGIE--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1010 for 315 contacts (3.2/contact) +
2D Compatibility (PS) -6098 + (NN) 1356 + (LL) 2668
1D Compatibility (HY) -400 + (ID) 600
Total energy: -2064.0 ( -6.55 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJR-query.scw
PDB file :
Tito_Scwrl_2ZJR.pdb
: