Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALPALEGVEHRHVDVAEGVRIHVADAGPADGPAVMLVHGFPQNWWEWRDLIGPLAADGNRVLCPDLRGAGWSSAPR--SRYTKTEMADDLAAVLDGLGVAKVKLVAHDWGGPVAFIMMLRHPEKVTGFFGVNTVAPWVKRDLGM-----LRNMWRFWYQIPMSLPVIGPRVISDPKGRYFRLLTGWVGGGFRVPDDDVR----------LYLDCMREPGHAEAGSRWYRTFQTREM--------LRWLRGEYND---------ARVDVPVRWLHGTGDPVITPDLLDGYAERASDFEVELVDGVGHWIVEQRPELVLDRVRAFLAAGTEQRD |
| 4J03 Chain:A ((237-534)) | ---------MSHGYVTVKPRVRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT--PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSL-------FRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152709 for 2166 contacts (-70.5/contact) +
2D Compatibility (PS) -27644 + (NN) -8791 + (LL) 2256
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -208438.0 ( -96.23 by residue)
QMean score : 0.404
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