Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLNDIQVWTTACAYDHLIPGRGVGVL-LDDGSQVALFRLDDGSVHAVGNVDPFSGAAVMSRGIVGDRGGRAMVQSPILKQAFALDDGSCLDDP-RVSVPVYPARVTPEGRIQVARVAV
2DE6 Chain:D ((4-106))
--------IWLKVCAASDMQPGTIRRVNRV-GAAPLAVYRV-GDQFYATEDTCTHGIA-SLSEGTLDG----DVIECPFHGGAFNVCTGMPASSPCTVPLGVFEVEVKE-GEVYVAGEK-
General information:
TITO was launched using:
RESULT:
Template:
2DE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65182 for 743 contacts (-87.7/contact) +
2D Compatibility (PS) -10992 + (NN) -3840 + (LL) 924
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -85040.0 ( -114.45 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2DE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DE6-query.scw
PDB file :
Tito_Scwrl_2DE6.pdb
: