Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRL-TDSPDMEIWSNRIERGLVHITGVTRLEVGFSAECGEI--ARREFREPPLSAMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
3H87 Chain:A ((17-152))
-TDQRWLIDKSALVRLTDSPD-MEIWSNRIERGLVHITGVTRLEVGFSAECGEIARREFREP-PLS-AMPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHR----
General information:
TITO was launched using:
RESULT:
Template:
3H87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31301 for 1003 contacts (-31.2/contact) +
2D Compatibility (PS) -14955 + (NN) -7500 + (LL) 44
1D Compatibility (HY) -15600 + (ID) 6050
Total energy: -75362.0 ( -75.14 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_3H87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H87-query.scw
PDB file :
Tito_Scwrl_3H87.pdb
: