Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVR--VRPTAASLPGVEMVTATVAHIDIAAQ-VVHTDNSVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEAL--EHGRIAV-AIAGVPFKCPAAPFEAAFLIAAQLGDRYATGTVQIDTF-TPDPLPMPVAGPEVGEA---LVSMLKDHGVGFHPRKALARVDEAARTMHFGDGTSE-------PFDLLAVVPPH--VPSAAARSAGLSESGWIPVDPRTLSTSADNVWAIGDAT----VLTLPNGKPLPKAAVFAEAQAAVVAHGVARHLGYDVAERHF-TGTGACYVETGDHQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT |
3T2K Chain:A ((4-406)) | -SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIR-HYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPG-SDPHEGPVQ-SIATVDHAERAFAEYQALLREPGPIVIGAMAGA--SCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAVCFADMGDRGAAFIALPQLKPRKVDVFAY--GRWVHLAKVAFEKYFIRKMK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207325 for 3293 contacts (-63.0/contact) +
2D Compatibility (PS) -41685 + (NN) -22767 + (LL) -164
1D Compatibility (HY) -16400 + (ID) 5400
Total energy: -293741.0 ( -89.20 by residue)
QMean score : 0.407
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