Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLMRTWIPL---------VILVVVIVG--GFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPG------TVADISYFDVNSEPQRVD---------GAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITV------DGKVRAERVSNEVNAYTYCLVKSA----------
4MGX Chain:A ((1-185))
QKVRAWGPGLETGQVGKSADFVVEAIGTLGFSIEGPSQAKIECDDKGDGSCDVRYW-PTEPGEYAVHVICDDEDIRDSPFIAHILPAPPDCFPDKVKAFGPGLEPTGCIVDKPAEFTIDARAAGKGDLKLYAQDADGCPIDIKVIPNGDGTFRCSYVPTKPIKHTIIISWGGVNVPKSPFRV
General information:
TITO was launched using:
RESULT:
Template:
4MGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34135 for 876 contacts (-39.0/contact) +
2D Compatibility (PS) -15260 + (NN) -6074 + (LL) 64
1D Compatibility (HY) -1200 + (ID) 1300
Total energy: -57905.0 ( -66.10 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_4MGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGX-query.scw
PDB file :
Tito_Scwrl_4MGX.pdb
: