Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATA-------------SRLVARLGPEAVRIIADTFAQLVTGQMRE--TRGTSE-NVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG |
| 3KRF Chain:A ((33-265)) | -----------------------------------------ESMRYSLL----AGGKRVRPMLCIAACELVGGDESTAMPAACAV-EMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEG---LVAGQVVDVCSEGMAEVGLDHLEF---IHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTK----------------KTTYPKLIGVEKSKEFADRLN-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37930 for 1570 contacts (-24.2/contact) +
2D Compatibility (PS) -20661 + (NN) -4935 + (LL) 10160
1D Compatibility (HY) -17600 + (ID) 3850
Total energy: -74816.0 ( -47.65 by residue)
QMean score : 0.410
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