Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGTPQPRALGPDALD--VSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMASVLSDAVRR--SVGQGAAMLKGEK---RSGLRVHARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
1R2Z Chain:A ((134-273))
---------LGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQ----------------
General information:
TITO was launched using:
RESULT:
Template:
1R2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67956 for 1021 contacts (-66.6/contact) +
2D Compatibility (PS) -14236 + (NN) -6183 + (LL) 1372
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -95053.0 ( -93.10 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_1R2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R2Z-query.scw
PDB file :
Tito_Scwrl_1R2Z.pdb
: