Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGAAPTNGA--PLSYPSICEGVHWGHLVGGHQPAY
2LIX Chain:A ((1-27))
---ACVTHEDCTLLCYDTI------GTCVDGKCKCM
General information:
TITO was launched using:
RESULT:
Template:
2LIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1045 for 122 contacts (-8.6/contact) +
2D Compatibility (PS) -2779 + (NN) -3902 + (LL) 336
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -10190.0 ( -83.52 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2LIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIX-query.scw
PDB file :
Tito_Scwrl_2LIX.pdb
: