Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAW-----QDHAEVSVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCG-------VPYTDAL-------PEMPEPAIEVEP-PVCD---CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
4UTN Chain:A ((26-275))
--IAIITGAGVSAESGVPTFRG-PGGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECTPAT---KYHFEGPCGSTLPPALE-------
General information:
TITO was launched using:
RESULT:
Template:
4UTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112145 for 1732 contacts (-64.7/contact) +
2D Compatibility (PS) -24224 + (NN) -11865 + (LL) 872
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -170212.0 ( -98.27 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_4UTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTN-query.scw
PDB file :
Tito_Scwrl_4UTN.pdb
: