Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVSAESGAPRRAGQRHEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRER---IPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVN-AVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR
4JD3 Chain:A ((2-350))--------------------------------SVIAGVFGALPPHRYSQSEITDSFVEF---PGLKEHEEIIRRLHAAAKVNGRHLVL-PLQQYPSL-----TDFGDANEIFIEKAVDLGVEALLGALDDANLRPSDIDMIATATVTGVAVPSLDARIAGRLGLRPDVRRMPLFGLGSVAGAAGVARLRDYLRGAPDDVAVLVSVELCSLTYPAVKPTVSSLVGTALFGDGAAAVVAVGDRRAEQVRAGGPDILDSRSSLYPDSLHIMGWDVGSHGLRLRLSPDLTNLIERYLANDVTTFLDAHRLTKDDIGAWVSHPGGPKVIDAVATSLALPPEALELTWRSLGEIGNLSSASILHILRDTIEKRPPSG--SAGLMLAMGPGFCTELVLL-----


General information:
TITO was launched using:
RESULT:

Template: 4JD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -337729 for 3190 contacts (-105.9/contact) +
2D Compatibility (PS) -36458 + (NN) -9828 + (LL) 2732
1D Compatibility (HY) -20800 + (ID) 5150
Total energy: -407233.0 ( -127.66 by residue)
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4JD3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JD3-query.scw
PDB file : Tito_Scwrl_4JD3.pdb: