Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVIDDQ-AKVVSWYDNEWGYSNRLVDLVTLVGKSL
3L0D Chain:A ((22-356))MSVRVAINGFGRIGRNILRAII---ESGRQDIEVVALNDLGSVETNAHLLRYDSVHGCFPGTVQVVGD-AIDI---LIKVFAERD-PAQLPWKALDIDIALECTGIFTARDKASAHLDAGAKRVLVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCLAPVAQVLHNTVGIEKGFMTTIHSYTGDQPVLDTMHRDLYRARAAALSMIPTSTGAAKAVGLVLPELKGLLDGVSIRVPTPNVSVVDLTFTAKRSTTIEEINTAIRTAAQGSLKGILDYTDEKLVSCDFNHNPHSAIFHNDQTKVIDGQLCRVLVWYDNEWGFSNRMCDTAVAFAKTI


General information:
TITO was launched using:
RESULT:

Template: 3L0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165409 for 2908 contacts (-56.9/contact) +
2D Compatibility (PS) -35098 + (NN) -11939 + (LL) 208
1D Compatibility (HY) -33200 + (ID) 9100
Total energy: -254538.0 ( -87.53 by residue)
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_3L0D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L0D-query.scw
PDB file : Tito_Scwrl_3L0D.pdb: