Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGATAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGALGIATGATHGLLQETTREVRWVRSTQIVAGHRTHPLRVAGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAAVVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGFPVLLKVTSDQLGAKGGAVILAVTLTRAPLLV--PLSAMQGNLIAHFVDR--RTQRLRALIAPALVVGGIGAVGMLAAGLTGPWLLRVGFGPDY--QTGGALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYLLGWVSATVASTLL--LLL------PMPLETRTVIALLFGPTVGIAIHVAALARRPD |
| 5C6P Chain:A ((10-218)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKEIRLLTALALPMLLAQVAQVG-IGFVDTVMAGGA--GKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIWFGLILGIFGMILMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYASSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGVATMAVFWFSALALWIYIA---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5C6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149090 for 1483 contacts (-100.5/contact) +
2D Compatibility (PS) -19923 + (NN) -4610 + (LL) 19852
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -158371.0 ( -106.79 by residue)
QMean score : 0.048
|
|
|