Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLDELADQLRQEHCVGVEV--LPLDLADT-QARAQLADRL-RSDAIAGLCNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALP--GMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWA------EIASAERFS-----IPLAQ-VSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR
3CSD Chain:B ((24-254))
------QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH---TEEAFDRITARVPIGRYVQPSEVAE--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120762 for 1659 contacts (-72.8/contact) +
2D Compatibility (PS) -22933 + (NN) -16479 + (LL) 3260
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -173464.0 ( -104.56 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3CSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CSD-query.scw
PDB file :
Tito_Scwrl_3CSD.pdb
: