Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSIAQEHDCLLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAHLCELGFTAT-GEDVVTSAQSAAHLLAGQL-----APGARVLIVGTEALANEVAAVGLRPVRRFEDRPD--AVVQGLSMTTGWSDLAEAALAIR-AGALWVAANVDPTLPTERG-LLPGNGSMVAALRTATGMDPRVAGKPAPALMTEAVARGDFRA----ALVVGDRLDTDIEGANAAGLPSLMVLTGVNSAWDAVYAEPVRRPTYIGHDLRSLHQDSKLLAVAPQPGWQIDVGGGAVTVCANGDVDDLEFIDDGLSIVRAVASAVWEARAADLHQRPLRIEAGDERARAALQRWSLMRSDHPVTSVGTQ |
| 5AES Chain:A ((13-264)) | LRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGA-VFVLGGEGLRAELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSP-YMFQCITE-DFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEA------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5AES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113637 for 1975 contacts (-57.5/contact) +
2D Compatibility (PS) -26163 + (NN) -15063 + (LL) 7652
1D Compatibility (HY) -15200 + (ID) 4450
Total energy: -166861.0 ( -84.49 by residue)
QMean score : 0.521
|
|
|