Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWA--RAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSL------MFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAILTSTRQHSDEGPYTISAEQ----IRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
| 3CSD Chain:B ((30-254)) | ----LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY--GPVDVLVNNAGRLGGGATAELADELWLDVVETN----LTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH---------TEEAFDRITARVP---IGRYVQPSEVAE-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72145 for 1633 contacts (-44.2/contact) +
2D Compatibility (PS) -21870 + (NN) -10954 + (LL) 5260
1D Compatibility (HY) -13200 + (ID) 3750
Total energy: -116659.0 ( -71.44 by residue)
QMean score : 0.306
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