Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMY---RLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
5CEG Chain:A ((3-47))
----NVEKMSVAVTPQQAAVMREAVEAGEYATASEIVREAVRDWLAKRE----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5CEG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11146 for 197 contacts (-56.6/contact) +
2D Compatibility (PS) -4724 + (NN) -4847 + (LL) 1320
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -20847.0 ( -105.82 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_5CEG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CEG-query.scw
PDB file :
Tito_Scwrl_5CEG.pdb
: