Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPHPTGSHARLPFVGIAEAYVLNAFRRAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISFADDNLASMIRLPQYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA |
| 1R8D Chain:A ((2-73)) | --------------KYQVKQVAEISGVSIRTLHHYDNIE----------LLNPSALT----DAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPN------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33605 for 466 contacts (-72.1/contact) +
2D Compatibility (PS) -7694 + (NN) -1637 + (LL) 9280
1D Compatibility (HY) -400 + (ID) 500
Total energy: -34556.0 ( -74.15 by residue)
QMean score : 0.317
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