Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAER-----TEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
4ELD Chain:A ((69-151))
---------------------------------------------------KVIAWLPGVN-KEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFENGVLSVILPKAE--------------
General information:
TITO was launched using:
RESULT:
Template:
4ELD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37882 for 430 contacts (-88.1/contact) +
2D Compatibility (PS) -8951 + (NN) -5927 + (LL) 4056
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -53854.0 ( -125.24 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4ELD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELD-query.scw
PDB file :
Tito_Scwrl_4ELD.pdb
: