Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAGKD--VIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLEQLDLVP-ANRNAAGQIVAAGRLTALEKLAED-PPAKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPARAVKSPADLDELANL |
| 2CUY Chain:A ((1-296)) | MYAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLLKLMWEGPEEALTLTENQQPALLAAGYAA----YRAFLEAGGKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156736 for 2688 contacts (-58.3/contact) +
2D Compatibility (PS) -31912 + (NN) -17774 + (LL) 888
1D Compatibility (HY) -13600 + (ID) 4950
Total energy: -224084.0 ( -83.36 by residue)
QMean score : 0.506
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