Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDR-QADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTN-VILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDV-VATEEPARLL-SQFIHGIKTLPVTWS |
| 4UAX Chain:A ((29-394)) | ------------------------------------------------------WMRANEPVFRDRNGLAAATTYQAVLDAERNPELFSSTGGIR-PDQ-PGMP----YMIDMDDPQHLLRRKLVNAGFTRK---RVMDKV-DSIGRLCDTLIDAVCERGECDFVRDIAAPLPMAVIGDMLGVLPTERDMLLKWSDDLVCGLSSHVDEAAIQKLMDTFAAYTEFTKDVITKRRAEPTDDLFSVLVNSEVEGQRMSDDEIVFETLLILIGGDETTRHTLSGGTEQLLRHRDQWDALVADVD-LLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNPNSHVAF-GFGTHFCLGNQLARLELRLMTERVLRRLPDLRLADDAPVPLRPANFVSGPESMPVVFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199953 for 2950 contacts (-67.8/contact) +
2D Compatibility (PS) -38269 + (NN) -14711 + (LL) 3596
1D Compatibility (HY) -27600 + (ID) 6950
Total energy: -283887.0 ( -96.23 by residue)
QMean score : 0.488
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