Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHAKVGDYLVVKGTTTERHDQHAEIIEVRSADGSPPYVVRWLVNGHETTVYPGSDAVVVTATEHAEAEKRAAARAGHAAT
4PLI Chain:A ((11-47))
--FEEGERVLAKHS---DCFYEAKVLKVEFKDNEWKYFVHYI--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4PLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8753 for 181 contacts (-48.4/contact) +
2D Compatibility (PS) -3728 + (NN) 895 + (LL) 3184
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -11552.0 ( -63.82 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4PLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PLI-query.scw
PDB file :
Tito_Scwrl_4PLI.pdb
: