Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEP---DDWD-APVPGTGAGVFTGIAGSLSRG-FR--GAD--RLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRGDA---SAWVGIGTPDFVEVP-IDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLGWSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLAC-TPFVAVSNSSETQSVFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAAD---NLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ |
| 3TV9 Chain:A ((28-457)) | ---LEEAVSTALELAS--GKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNR----KGSASSTDLSPQAIARTVQAALDIARYTSPDPCA-GVADKELLAFDAPNLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLFSCVIAEE-DMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLL-DSL----GKQILPDWLTIEEHPHLLKGLASTPFDS------------EGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQG-VSAITGDYSRGA-AG-FWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRS--------NIQCGSVLLPEMKI------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182429 for 3402 contacts (-53.6/contact) +
2D Compatibility (PS) -43700 + (NN) -17239 + (LL) 3432
1D Compatibility (HY) -8400 + (ID) 3200
Total energy: -251536.0 ( -73.94 by residue)
QMean score : 0.406
|
|
|