Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAEHCRGAGGCDECPSVMPEHPTALFHDVAAIALAQPGAEPGAMMGFPCRPALLPHLSRAVMRCVRTRSASTSLGVSVIAGQLPAAGSRHRLGAPCRHVRWWLASDGHWGMVSYIPTALNVSMGGIVGWRCVP
1UWM Chain:A ((38-53))
------DCGGACACSTCHAYVD------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2538 for 50 contacts (-50.8/contact) +
2D Compatibility (PS) -1825 + (NN) -2977 + (LL) 7816
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -1774.0 ( -35.48 by residue)
QMean score : 0.908
(partial model without unconserved sides chains):
PDB file :
Tito_1UWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWM-query.scw
PDB file :
Tito_Scwrl_1UWM.pdb
: