Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEKAPQKSVADFWFDPLCPWCWITSRWILEVAKVR----DIEVNFHVMSLAILNE-NR-DD----LPEQY----------R-----------------EGM-ARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGNHE--LDEVITQSLADAGLPAELAKAATSD--AYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD |
3GL5 Chain:A ((2-218)) | -------HMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLGAQAAAEGLAYRTRDRDHGSTFDLHRLLHLAKER-G--RHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLADPAAYADEVRADEREA-AQLG-ATGVPFFVLDRAY----GVSGAQPAEVFTQALTQAWGER------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74420 for 1293 contacts (-57.6/contact) +
2D Compatibility (PS) -18084 + (NN) -2996 + (LL) 2072
1D Compatibility (HY) -800 + (ID) 1650
Total energy: -95878.0 ( -74.15 by residue)
QMean score : 0.433
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