Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDIGAPVTVQVAVDPPYPVVIGTGLLDELEDLLADRHKVAVVHQPGLAETAEEIRKRLAGKGVD------AHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFI-ADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRERYRWRHGAAVSVGLVFAAELARLAGRLDDATAQRHR-TILSSLGLPVSYDPDA-LPQLLEIMAGDKKT-RAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVCAP |
| 1XAG Chain:A ((40-321)) | ----------------------------------------------------EYVNQYFANKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEY--YHKIPHGHAVMVGIIYQFIVAN--ALFDSKHDISHYIQYLIQLGYPLDMITDLDFETLYQYMLSDKKNDKQGV--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106943 for 2165 contacts (-49.4/contact) +
2D Compatibility (PS) -29087 + (NN) -9213 + (LL) 5964
1D Compatibility (HY) -24000 + (ID) 5050
Total energy: -168329.0 ( -77.75 by residue)
QMean score : 0.414
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