Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHLTPVAAPRLACAFVPTNAQRRATAKRKLERQLERRAKQAKRRRILTIVGGSLAAVAVIVAVVVTVVVNKDDHQSTTSATPTDSASTSPPQAATAPPLPPFKPSANLGANCQYPPSPDKAVKPVKLPRTGKVPTDPAQVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGP----GYQFANE---YPTDQYSAN----------DPKLNEPVIYPRGTLAMANAG-PNTNSSQFFMVY-RDSKLPPQYTVFGTIQA-DGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLLD |
| 4R3F Chain:A ((17-195)) | ---------------------------------------------------------------------------------------------------------------------------------------------AVIIHTTQGDLKVELFAKQTPLTCRNFLQHSLDGYYDGTIFHRLVPG---FIIQGGDPTGTGHGGESIYDGGAFSGDLDPWPMDQRKGHNAGPMGVNFKDEFHSRLKFNRRGLLGMANEGAPDTNGSQFFFTLGKAEELNNKNTLFGRVAAGDTIYNLMKWGEAELIEGTE--RPQYPVKITNI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76693 for 1175 contacts (-65.3/contact) +
2D Compatibility (PS) -17387 + (NN) -11691 + (LL) 8632
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -109589.0 ( -93.27 by residue)
QMean score : 0.547
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