Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDSGQLGAADTPLRLLSSVHYLTDGELPQLYDYPDDGTWLRANFISSLDG-GATVDGTSGAMAGPGDRFVFNLLRELADVIVVGVGTV-------RIEGYSGVRMGVVQRQHRQARGQSEVPQLAIVTRSGRLDRDMAVFTRTEMAPLVLTTTAVADDTRQRLAGLAEVIACSGDDPGTVDEAVLVSQLAAR-GLRRILTEGGPTLLGTFVERDVLDELCLTIAPYVVGGLARRIVTGPGQVLTRMRCAHVLTDDSGYLYTRYVKT
3ZPC Chain:A ((173-348))
---------------------------------------YVRLKVASSLDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIDTVIADDCQLNVRSLHNIDIETVAQ-----------PKRVILDRRGRLPLTAKILENPE-------TVMVMGPYRQELADLG-VIQLEIQPLKT-----LLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQSARAMFNA----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZPC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105324 for 1205 contacts (-87.4/contact) +
2D Compatibility (PS) -17619 + (NN) -2580 + (LL) 5224
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -135499.0 ( -112.45 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_3ZPC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZPC-query.scw
PDB file :
Tito_Scwrl_3ZPC.pdb
: