Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVVAVTIFVAAYVLIASDRVNKTMVALTGAAAVVVLPVITSHDIFYSHDTGIDWDVIFLLVGMMIIVGVLRQTGVFEYTAIWAAKRARGSPLRIMILLVLVSALASALLDNVTTVLLIAPVTLLVCDRLNINTTSFLMAEVFASNIGGAATLVGDPPNIIVAS----RAGL-------TFNDFMLHLTPLVVIVLIALIAVLPRLFGSITVEADRIADVMALDEGEAIRDRGLLVKC---GAVLVLVFAAFVAHPVL------------HIQ-PSLVALLGAGM-LIVV---SGL-T----RSEYLSSVEW------DTLLFFAGLFIMVGALVKTGVVND-LARAATQL-TGG-NIVATAFLILGVSAPISGII-DNIPYVATMTPLVAELVAVMGGQPSTDTPWWALALGADFGGNLTAIGASANVVMLGIARRAGAPISFWEFTRKGAVVTAVSIALAAIYLWLRYFVLLH |
| 4R0C Chain:A ((81-481)) | ------------------------------------------------------APLG-VVLVAMLGLGVAEQSGLLSVSLASLVRRSSGGAL--V-FTVAFAGVLSSLT-VDAGYVVLIPLAGLVFQLAGRPPIAGIATAFAAVSGGFSANLLVGPVDATLAGLSTEAAHIIDPDRTVAATGNYWFIIASTFLVTGLVTL-ITR-TLTEPRLAHANTVADASV-DAPQIHSRAMKWTGLTLAILLAGLALLVLP-NDAPLRHPDTGSVLGSPFIHGLVVIVALIAGICGAVYGRVSGQFRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALTVPKVVLLLLFVVLTALINLMIGSASAKWSILAPVFIPMLMLLG-I-SPEASQAAYRVGDSSTNIITPLMPY-FVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLG-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4R0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -324903 for 2926 contacts (-111.0/contact) +
2D Compatibility (PS) -37333 + (NN) -17101 + (LL) 7024
1D Compatibility (HY) -14400 + (ID) 2700
Total energy: -389413.0 ( -133.09 by residue)
QMean score : 0.357
|
|
|