Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAGLLPAIGFALSMAGLILLWRLLRRESARPVVAGFCGVAVCALIAYLVGQSKGYFLLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAARFIVQRHLYDADKTGWLGVARIGMGWPLTALAALATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE |
2AMN Chain:A ((1-26)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVKRVWPLVIRTVIAGYNLYRAIKKK----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5202 for 106 contacts (-49.1/contact) +
2D Compatibility (PS) -2746 + (NN) -540 + (LL) 16796
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 6358.0 ( 59.98 by residue)
QMean score : -0.327
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