Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASRTMVSSGSEFESAVG-YSRAVRIGPLVVVAG----TTGSGD---DIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIR---PVTSMVEVTALIAPGLLVEIEADAYVGSAVADRNSGAGPKDPSPAGG
1QU9 Chain:A ((2-123))
---SKTIATENAP--AAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEV-ARLPKDVKIEIEA-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43215 for 756 contacts (-57.2/contact) +
2D Compatibility (PS) -12041 + (NN) -4254 + (LL) 508
1D Compatibility (HY) -8000 + (ID) 1700
Total energy: -68702.0 ( -90.88 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1QU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QU9-query.scw
PDB file :
Tito_Scwrl_1QU9.pdb
: