Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTS----PETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPV-LDETWRGETGEWRFSRSGLRYRLYSYHRS
3TQB Chain:A ((2-145))
IITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIG---KPLPHRRNIVITQQKNLIIEGCDIFYSLDDALSALTKEPEVIIIGGARIFKEALPKADKMILTIINHSF---EGDVYFPEWNDKEWK-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91231 for 909 contacts (-100.4/contact) +
2D Compatibility (PS) -14434 + (NN) -5546 + (LL) 1556
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -125555.0 ( -138.12 by residue)
QMean score : 0.764
(partial model without unconserved sides chains):
PDB file :
Tito_3TQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQB-query.scw
PDB file :
Tito_Scwrl_3TQB.pdb
: