Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSATGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQAR-SLDDLAERPALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLRPATMHPG |
3HAY Chain:A ((47-255)) | ------GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVP----EDKIIQ--------------VMKEFEGEIIQRPPLRSAVK---RR--------------LRTRKVYYIEVLEIEGRDVLFRVGVE----AGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVD---YYYFWKEDGIEEYFRKAIQPMEKAV----EHLPKVWI-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105422 for 1520 contacts (-69.4/contact) +
2D Compatibility (PS) -21328 + (NN) 131 + (LL) 5172
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -141147.0 ( -92.86 by residue)
QMean score : 0.389
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