Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
4DYQ Chain:A ((10-58))
-----PSDYMPEVADDICSLLSSG--------ESLLKVCKRPGMPDKSTVFRWLAKHEDFRD----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4DYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12358 for 290 contacts (-42.6/contact) +
2D Compatibility (PS) -5310 + (NN) -1944 + (LL) 3680
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -18732.0 ( -64.59 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_4DYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DYQ-query.scw
PDB file :
Tito_Scwrl_4DYQ.pdb
: